An open API service indexing awesome lists of open source software.

awesome-python-data-science

From gitlab
https://github.com/jacob98415/awesome-python-data-science

Last synced: 7 days ago
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  • Model Explanation

    • NLP

      • ELI5 - A library for debugging/inspecting machine learning classifiers and explaining their predictions.
      • Lime - Explaining the predictions of any machine learning classifier. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • FairML - FairML is a python toolbox auditing the machine learning models for bias. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • L2X - Code for replicating the experiments in the paper *Learning to Explain: An Information-Theoretic Perspective on Model Interpretation*.
      • PDPbox - Partial dependence plot toolbox.
      • PyCEbox - Python Individual Conditional Expectation Plot Toolbox.
      • model-analysis - Model analysis tools for TensorFlow. <img height="20" src="img/tf_big2.png" alt="sklearn">
      • themis-ml - A library that implements fairness-aware machine learning algorithms. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • treeinterpreter - Interpreting scikit-learn's decision tree and random forest predictions. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • Auralisation - Auralisation of learned features in CNN (for audio).
      • CapsNet-Visualization - A visualization of the CapsNet layers to better understand how it works.
      • lucid - A collection of infrastructure and tools for research in neural network interpretability.
      • Netron - Visualizer for deep learning and machine learning models (no Python code, but visualizes models from most Python Deep Learning frameworks).
      • mxboard - Logging MXNet data for visualization in TensorBoard. <img height="20" src="img/mxnet_big.png" alt="MXNet based">
      • Skater - Python Library for Model Interpretation.
      • AI Explainability 360 - Interpretability and explainability of data and machine learning models.
      • tensorboard-pytorch - Tensorboard for PyTorch (and chainer, mxnet, numpy, ...).
      • shap - A unified approach to explain the output of any machine learning model. <img height="20" src="img/sklearn_big.png" alt="sklearn">
  • Natural Language Processing

    • NLP

      • spaCy - Industrial-Strength Natural Language Processing.
      • gensim - Topic Modelling for Humans.
      • NLTK - Modules, data sets, and tutorials supporting research and development in Natural Language Processing.
      • CLTK - The Classical Language Toolkik.
      • pyMorfologik - Python binding for <a href="https://github.com/morfologik/morfologik-stemming">Morfologik</a>.
      • skift - Scikit-learn wrappers for Python fastText. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • Phonemizer - Simple text-to-phonemes converter for multiple languages.
      • flair - Very simple framework for state-of-the-art NLP.
  • Optimization

    • NLP

      • OR-Tools - An open-source software suite for optimization by Google; provides a unified programming interface to a half dozen solvers: SCIP, GLPK, GLOP, CP-SAT, CPLEX, and Gurobi.
      • Optuna - A hyperparameter optimization framework.
      • Spearmint - Bayesian optimization.
      • scikit-opt - Heuristic Algorithms for optimization.
      • sklearn-genetic-opt - Hyperparameters tuning and feature selection using evolutionary algorithms. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • SMAC3 - Sequential Model-based Algorithm Configuration.
      • Optunity - Is a library containing various optimizers for hyperparameter tuning.
      • hyperopt - Distributed Asynchronous Hyperparameter Optimization in Python.
      • hyperopt-sklearn - Hyper-parameter optimization for sklearn. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • sklearn-deap - Use evolutionary algorithms instead of gridsearch in scikit-learn. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • Bayesian Optimization - A Python implementation of global optimization with gaussian processes.
      • SafeOpt - Safe Bayesian Optimization.
      • scikit-optimize - Sequential model-based optimization with a `scipy.optimize` interface.
      • Solid - A comprehensive gradient-free optimization framework written in Python.
      • PySwarms - A research toolkit for particle swarm optimization in Python.
      • Platypus - A Free and Open Source Python Library for Multiobjective Optimization.
      • GPflowOpt - Bayesian Optimization using GPflow. <img height="20" src="img/tf_big2.png" alt="sklearn">
      • Talos - Hyperparameter Optimization for Keras Models.
      • nlopt - Library for nonlinear optimization (global and local, constrained or unconstrained).
      • BoTorch - Bayesian optimization in PyTorch. <img height="20" src="img/pytorch_big2.png" alt="PyTorch based/compatible">
  • Probabilistic Methods

    • NLP

      • pomegranate - Probabilistic and graphical models for Python. <img height="20" src="img/gpu_big.png" alt="GPU accelerated">
      • PyMC - Bayesian Stochastic Modelling in Python.
      • InferPy - Deep Probabilistic Modelling Made Easy. <img height="20" src="img/tf_big2.png" alt="sklearn">
      • PyStan - Bayesian inference using the No-U-Turn sampler (Python interface).
      • sklearn-bayes - Python package for Bayesian Machine Learning with scikit-learn API. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • pgmpy - A python library for working with Probabilistic Graphical Models.
      • PtStat - Probabilistic Programming and Statistical Inference in PyTorch. <img height="20" src="img/pytorch_big2.png" alt="PyTorch based/compatible">
      • PyVarInf - Bayesian Deep Learning methods with Variational Inference for PyTorch. <img height="20" src="img/pytorch_big2.png" alt="PyTorch based/compatible">
      • emcee - The Python ensemble sampling toolkit for affine-invariant MCMC.
      • hsmmlearn - A library for hidden semi-Markov models with explicit durations.
      • pyhsmm - Bayesian inference in HSMMs and HMMs.
      • GPyTorch - A highly efficient and modular implementation of Gaussian Processes in PyTorch. <img height="20" src="img/pytorch_big2.png" alt="PyTorch based/compatible">
      • MXFusion - Modular Probabilistic Programming on MXNet. <img height="20" src="img/mxnet_big.png" alt="MXNet based">
      • sklearn-crfsuite - A scikit-learn-inspired API for CRFsuite. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • pyro - A flexible, scalable deep probabilistic programming library built on PyTorch. <img height="20" src="img/pytorch_big2.png" alt="PyTorch based/compatible">
      • skpro - Supervised domain-agnostic prediction framework for probabilistic modelling by [The Alan Turing Institute](https://www.turing.ac.uk/). <img height="20" src="img/sklearn_big.png" alt="sklearn">
  • Quantum Computing

    • NLP

      • qiskit - Qiskit is an open-source SDK for working with quantum computers at the level of circuits, algorithms, and application modules.
      • cirq - A python framework for creating, editing, and invoking Noisy Intermediate Scale Quantum (NISQ) circuits.
      • QML - A Python Toolkit for Quantum Machine Learning.
  • Reinforcement Learning

    • NLP

      • OpenAI Gym - A toolkit for developing and comparing reinforcement learning algorithms.
      • garage - A toolkit for reproducible reinforcement learning research.
      • OpenAI Baselines - High-quality implementations of reinforcement learning algorithms.
      • Stable Baselines - A set of improved implementations of reinforcement learning algorithms based on OpenAI Baselines.
      • TF-Agents - A library for Reinforcement Learning in TensorFlow. <img height="20" src="img/tf_big2.png" alt="sklearn">
      • TensorForce - A TensorFlow library for applied reinforcement learning. <img height="20" src="img/tf_big2.png" alt="sklearn">
      • TRFL - TensorFlow Reinforcement Learning. <img height="20" src="img/tf_big2.png" alt="sklearn">
      • Dopamine - A research framework for fast prototyping of reinforcement learning algorithms.
      • keras-rl - Deep Reinforcement Learning for Keras. <img height="20" src="img/keras_big.png" alt="Keras compatible">
      • ChainerRL - A deep reinforcement learning library built on top of Chainer.
      • Coach - Easy experimentation with state-of-the-art Reinforcement Learning algorithms.
      • Horizon - A platform for Applied Reinforcement Learning.
      • RLlib - Scalable Reinforcement Learning.
  • Spatial Analysis

    • NLP

      • GeoPandas - Python tools for geographic data. <img height="20" src="img/pandas_big.png" alt="pandas compatible">
      • PySal - Python Spatial Analysis Library.
  • Statistics

    • NLP

      • statsmodels - Statistical modeling and econometrics in Python.
      • stockstats - Supply a wrapper ``StockDataFrame`` based on the ``pandas.DataFrame`` with inline stock statistics/indicators support.
      • weightedcalcs - A pandas-based utility to calculate weighted means, medians, distributions, standard deviations, and more.
      • scikit-posthocs - Pairwise Multiple Comparisons Post-hoc Tests.
      • Alphalens - Performance analysis of predictive (alpha) stock factors.
  • Time Series

    • NLP

      • dateutil - Powerful extensions to the standard datetime module
      • darts - A python library for easy manipulation and forecasting of time series.
      • statsforecast - Lightning fast forecasting with statistical and econometric models.
      • mlforecast - Scalable machine learning-based time series forecasting.
      • neuralforecast - Scalable machine learning-based time series forecasting.
      • tslearn - Machine learning toolkit dedicated to time-series data. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • tick - Module for statistical learning, with a particular emphasis on time-dependent modeling. <img height="20" src="img/sklearn_big.png" alt="sklearn">
      • greykite - A flexible, intuitive, and fast forecasting library next.
      • Prophet - Automatic Forecasting Procedure.
      • PyFlux - Open source time series library for Python.
      • bayesloop - Probabilistic programming framework that facilitates objective model selection for time-varying parameter models.
      • luminol - Anomaly Detection and Correlation library.
      • maya - makes it very easy to parse a string and for changing timezones
      • Chaos Genius - ML powered analytics engine for outlier/anomaly detection and root cause analysis
      • sktime - A unified framework for machine learning with time series. <img height="20" src="img/sklearn_big.png" alt="sklearn">
  • Visualization

    • Automatic Plotting

    • General Purposes

      • Matplotlib - Plotting with Python.
      • seaborn - Statistical data visualization using matplotlib.
      • prettyplotlib - Painlessly create beautiful matplotlib plots.
      • python-ternary - Ternary plotting library for Python with matplotlib.
      • missingno - Missing data visualization module for Python.
      • physt - Improved histograms.
    • Interactive plots

      • Altair - Declarative statistical visualization library for Python. Can easily do many data transformation within the code to create graph
      • animatplot - A python package for animating plots built on matplotlib.
      • Bokeh - Interactive Web Plotting for Python.
      • bqplot - Plotting library for IPython/Jupyter notebooks
      • pyecharts - Migrated from [Echarts](https://github.com/apache/echarts), a charting and visualization library, to Python's interactive visual drawing library.<img height="20" src="img/pyecharts.png" alt="pyecharts"> <img height="20" src="img/echarts.png" alt="echarts">
    • Map

      • folium - Makes it easy to visualize data on an interactive open street map
      • geemap - Python package for interactive mapping with Google Earth Engine (GEE)
    • NLP

  • Web Scraping