Ecosyste.ms: Awesome

https://github.com/liberu-genealogy/php-dna

DNA processing and manipulating for PHP 8.3

dna dna-processing laravel laravel10 php php8

Last synced: 16 Dec 2024

https://github.com/slowikj/seqr

fast and comprehensive k-mer counting package

bioinformatics bioinformatics-tool dna-processing feature-engineering feature-extraction genomics hashing hashing-algorithms k-mer k-mer-counting kmer kmer-counting kmer-frequency-count kmers ngram ngrams protein-sequences rcpp rcppparallel rpackage

Last synced: 19 Nov 2024

https://github.com/cgdsoftware/php-dna

A library for reading and writing DNA test kit files in PHP.

dna dna-processing library php php-library php8

Last synced: 13 Nov 2024

https://github.com/cgdsoftware/laravel-dna

Package to parse DNA kit files, and import them into Laravel

dna dna-processing dna-sequencing php php-library php8

Last synced: 13 Nov 2024

https://github.com/gagniuc/sequence-logo-relative-style

Sequence Logo - relative style is an alternative that provides full control over how the graphics of a Sequence Logo should look like, and is an alternative to an application called WebLogo. All the inner workings of this open source application are written in native javascript.

dna dna-processing html-css-javascript html5 html5-canvas javascript js motif proteomics rna-sequences sequence-logo

Last synced: 15 Nov 2024

https://github.com/gagniuc/objective-digital-stains

This is an application that shows the informational structure of DNA sequences. The objective digital stain (ODS) is represented by a distribution of points on a two-dimensional image, which reflects the information structure inside a DNA/RNA sequence.

dna-processing dna-sequences genetics genomics html5-canvas information javascript js objective-digital-stains ods visualization

Last synced: 15 Nov 2024

https://github.com/gagniuc/simple-js-implementation-of-objective-digital-stains

Simple JS implementation of Objective Digital Stain (ODS) produces ODS images from DNA sequences. On ODSs, the information content (IC) is represented vertically on the y-axis and the frequency of different letters is represented horizontally on the x-axis.

algorithm bioinformatics dna dna-processing dna-sequences genetics genomics javascript js objective-digital-stain ods rna rna-sequence visualization

Last synced: 15 Nov 2024

https://github.com/mathieu2301/projet-bioinfo

bioinformatics dna-alignment dna-processing dna-sequences dna-sequencing

Last synced: 15 Nov 2024

https://github.com/gagniuc/objective-digital-stains-in-php

This code generates Objective Digital Stains (ODSs) and it is implemented in PHP. On ODSs, the information content (IC) is represented vertically on the y-axis and the frequency of different letters is represented horizontally on the x-axis.

dna dna-processing dna-sequences functions objective-digital-stains ods php php7 rna

Last synced: 15 Nov 2024

https://github.com/navpreetdevpuri/dnac

DNAc is a programming language for DNAs.

dna dna-assembly dna-methylation dna-processing dna-sequence genetic-algorithm genetic-analysis genetic-programming genetic-programming-algorithm genetic-variants genetics

Last synced: 07 Dec 2024

https://github.com/limitedeternity/fastautils

Various utilities for working with FASTA nucleotide sequences

bioinformatics dna-processing fasta-sequences flutter-web flutter-windows

Last synced: 20 Dec 2024

https://github.com/ramy-badr-ahmed/bioinformatics-misc-scripts

Miscellaneous Scripts in Bioinformatics

clinical-data-warehouse clinical-trial-management-system clinical-trials clinical-trials-retrieval database-design database-schema dna-processing dna-sequences fasta-sequences gz-compression mass-spectrometry-data md5-python mfg-test mgf peptide-identification peptide-sequences sequence-spectrum sql-cte sqlite

Last synced: 20 Dec 2024

https://github.com/r-rijnbeek/dna_processing

Repository that has the standard DNA, RNA and Protein Objects and the standard methods to interact with them.

dna dna-processing package pipy python

Last synced: 15 Nov 2024