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Projects in Awesome Lists tagged with kmers
A curated list of projects in awesome lists tagged with kmers .
https://github.com/suchapalaver/krust
Bioinformatics 101 tool for counting unique k-length substrings in DNA
beginner-friendly bioinformatics bioinformatics-tool bitpacking bytes clap dashmap genomics insta k-mer k-mer-counting k-mers kmer kmer-counting kmers needletail parallelization rayon rust rust-bio
Last synced: 28 Oct 2024
https://github.com/suchapalaver/fastas2kmers
A naive implementation of a k-mer counter in Python, takes fasta files and k-mer length requests and outputs all k-mers of length k, their reverse complement, and their frequency within their respective sequence for each sequence in the file.
fasta-format fasta-sequences kmer kmer-counting kmer-frequency-count kmer-length kmers
Last synced: 12 Oct 2024