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Projects in Awesome Lists tagged with mcmc

A curated list of projects in awesome lists tagged with mcmc .

https://github.com/pymc-devs/pymc

Bayesian Modeling and Probabilistic Programming in Python

bayesian-inference mcmc probabilistic-programming pytensor python statistical-analysis variational-inference

Last synced: 30 Dec 2024

https://github.com/pyro-ppl/numpyro

Probabilistic programming with NumPy powered by JAX for autograd and JIT compilation to GPU/TPU/CPU.

bayesian-inference hmc inference-algorithms jax mcmc numpy probabilistic-programming pyro

Last synced: 01 Jan 2025

https://github.com/dfm/emcee

The Python ensemble sampling toolkit for affine-invariant MCMC

mcmc mcmc-sampler probabilistic-data-analysis python

Last synced: 31 Dec 2024

https://github.com/avehtari/bda_py_demos

Bayesian Data Analysis demos for Python

bayesian bayesian-data-analysis bayesian-inference mcmc python stan

Last synced: 05 Jan 2025

https://github.com/avehtari/BDA_py_demos

Bayesian Data Analysis demos for Python

bayesian bayesian-data-analysis bayesian-inference mcmc python stan

Last synced: 27 Nov 2024

https://github.com/mxgmn/convchain

Bitmap generation from a single example with convolutions and MCMC

algorithm convchain csharp gamedev machine-learning mcmc procedural-generation texture-synthesis

Last synced: 04 Jan 2025

https://github.com/mxgmn/ConvChain

Bitmap generation from a single example with convolutions and MCMC

algorithm convchain csharp gamedev machine-learning mcmc procedural-generation texture-synthesis

Last synced: 12 Oct 2024

https://github.com/jwarmenhoven/dbda-python

Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code

bayesian-data-analysis bayesian-inference hierarchical-models kruschke mcmc probabilistic-programming pymc3

Last synced: 04 Jan 2025

https://github.com/JWarmenhoven/DBDA-python

Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code

bayesian-data-analysis bayesian-inference hierarchical-models kruschke mcmc probabilistic-programming pymc3

Last synced: 26 Oct 2024

https://github.com/stan-dev/bayesplot

bayesplot R package for plotting Bayesian models

bayesian ggplot2 mcmc pandoc r-package stan statistical-graphics visualization

Last synced: 04 Jan 2025

https://github.com/StatisticalRethinkingJulia/StatisticalRethinking.jl

Julia package with selected functions in the R package `rethinking`. Used in the SR2... projects.

julia-package mcmc regression-models statistical-rethinking

Last synced: 13 Nov 2024

https://github.com/wiseodd/mcmc

Collection of Monte Carlo (MC) and Markov Chain Monte Carlo (MCMC) algorithms applied on simple examples.

bayesian-inference machine-learning markov-chain-monte-carlo mcmc sampling-methods

Last synced: 31 Dec 2024

https://github.com/wiseodd/MCMC

Collection of Monte Carlo (MC) and Markov Chain Monte Carlo (MCMC) algorithms applied on simple examples.

bayesian-inference machine-learning markov-chain-monte-carlo mcmc sampling-methods

Last synced: 12 Nov 2024

https://github.com/turinglang/mcmcchains.jl

Types and utility functions for summarizing Markov chain Monte Carlo simulations

hacktoberfest julia-language markov-chain mcmc

Last synced: 04 Jan 2025

https://github.com/TuringLang/MCMCChains.jl

Types and utility functions for summarizing Markov chain Monte Carlo simulations

hacktoberfest julia-language markov-chain mcmc

Last synced: 30 Oct 2024

https://github.com/turinglang/advancedhmc.jl

Robust, modular and efficient implementation of advanced Hamiltonian Monte Carlo algorithms

hacktoberfest hamiltonian-monte-carlo hmc mcmc nuts

Last synced: 05 Jan 2025

https://github.com/mlwhiz/data_science_blogs

A repository to keep track of all the code that I end up writing for my blog posts.

blogging chatbot data datascience gan graphs machine-learning mcmc python spark streamlit time-series xgboost

Last synced: 30 Dec 2024

https://github.com/MLWhiz/data_science_blogs

A repository to keep track of all the code that I end up writing for my blog posts.

blogging chatbot data datascience gan graphs machine-learning mcmc python spark streamlit time-series xgboost

Last synced: 13 Nov 2024

https://github.com/TuringLang/AdvancedHMC.jl

Robust, modular and efficient implementation of advanced Hamiltonian Monte Carlo algorithms

hamiltonian-monte-carlo hmc mcmc nuts

Last synced: 30 Oct 2024

https://github.com/StanJulia/Stan.jl

Stan.jl illustrates the usage of the 'single method' packages, e.g. StanSample, StanOptimize, etc.

julia mcmc stan

Last synced: 20 Nov 2024

https://github.com/kazewong/flowMC

Normalizing-flow enhanced sampling package for probabilistic inference in Jax

jax mcmc normalizing-flows stat

Last synced: 30 Oct 2024

https://github.com/stan-dev/posterior

The posterior R package

bayes bayesian mcmc r-package

Last synced: 03 Jan 2025

https://github.com/statisticalrethinkingjulia/turingmodels.jl

Implementations of the models from the Statistical Rethinking book with Turing.jl

franklin julia-language mcmc statisticalrethinking turing turinglang

Last synced: 29 Sep 2024

https://github.com/cmbant/getdist

MCMC sample analysis, kernel densities, plotting, and GUI

contour-plot kernel-density-estimation mcmc plotting-in-python sampling-methods statistical-inference

Last synced: 04 Jan 2025

https://github.com/mggg/gerrychain

Use MCMC to analyze districting plans and gerrymanders

gerrymandering gis mcmc python

Last synced: 03 Jan 2025

https://github.com/mschauer/bridge.jl

A statistical toolbox for diffusion processes and stochastic differential equations. Named after the Brownian Bridge.

bayesian-inference brownian-motion diffusion diffusion-processes gamma-process julia levy-process mcmc ornstein-uhlenbeck sde simulating-diffusion-bridges stochastic-differential-equations vasicek

Last synced: 20 Dec 2024

https://github.com/turinglang/advancedmh.jl

Robust implementation for random-walk Metropolis-Hastings algorithms

adaptive-mcmc hacktoberfest mcmc metropolis-hastings

Last synced: 17 Nov 2024

https://github.com/TuringLang/AdvancedMH.jl

Robust implementation for random-walk Metropolis-Hastings algorithms

adaptive-mcmc hacktoberfest mcmc metropolis-hastings

Last synced: 30 Oct 2024

https://github.com/doi-usgs/geobipy

Geophysical Bayesian Inference in Python. Docs:

bayesian bayesian-inference geophysics h5py hdf5 mcmc mpi mpi4py parallel trans-dimensional

Last synced: 02 Jan 2025

https://github.com/floswald/smm.jl

Simulated Method of Moments for Julia

estimation julia mcmc

Last synced: 26 Nov 2024

https://github.com/turinglang/turingglm.jl

Bayesian Generalized Linear models using `@formula` syntax.

bayesian-inference bayesian-statistics hmc julia-language mcmc turing

Last synced: 31 Dec 2024

https://github.com/jangevaare/pathogen.jl

Simulation, visualization, and inference of individual level infectious disease models with Julia

epidemics evolution infectious-diseases julia mcmc transmission-network

Last synced: 08 Nov 2024

https://github.com/Starfish-develop/Starfish

Tools for Flexible Spectroscopic Inference

astronomy astrophysics inference mcmc python spectra starfish

Last synced: 17 Nov 2024

https://github.com/dm13450/dirichletprocess

Build dirichletprocess objects for data analysis

bayesian bayesian-inference bayesian-statistics dirichlet-process mcmc r r-package

Last synced: 03 Jan 2025

https://github.com/handley-lab/anesthetic

Nested Sampling post-processing and plotting

bayesian-inference fastkde matplotlib mcmc nested-sampling numpy pandas samples scipy

Last synced: 04 Jan 2025

https://github.com/avehtari/bda_m_demos

Bayesian Data Analysis demos for Matlab/Octave

bayesian bayesian-data-analysis bayesian-inference mcmc octave stan

Last synced: 15 Oct 2024

https://github.com/eigenfoo/littlemcmc

A lightweight and performant implementation of HMC and NUTS in Python, spun out of the PyMC project.

hmc markov-chain-monte-carlo mcmc nuts python

Last synced: 31 Dec 2024

https://github.com/lxuechen/bdmc

PyTorch implementation of Bidirectional Monte Carlo, Annealed Importance Sampling, and Hamiltonian Monte Carlo.

annealed-importance-sampling bayesian-inference bidirectional-monte-carlo hamiltonian-monte-carlo mcmc pytorch

Last synced: 28 Oct 2024

https://github.com/helske/walker

Bayesian Generalized Linear Models with Time-Varying Coefficients

bayesian generalized-linear-models mcmc r stan time-series

Last synced: 30 Dec 2024

https://github.com/oscaribv/pyaneti

A multi-planet Radial Velocity and Transit modelling software

exoplanets mcmc multi-planet-fitting planets radial-velocities transiting-planets

Last synced: 03 Nov 2024

https://github.com/yomichi/SpinMonteCarlo.jl

Markov chain Monte Carlo solver for lattice spin systems implemented in Julialang

ising-model julialang lattice mcmc monte-carlo physics quantum-physics spin statistical-physics

Last synced: 30 Oct 2024

https://github.com/yomichi/spinmontecarlo.jl

Markov chain Monte Carlo solver for lattice spin systems implemented in Julialang

ising-model julialang lattice mcmc monte-carlo physics quantum-physics spin statistical-physics

Last synced: 12 Oct 2024

https://github.com/tpapp/logdensityproblems.jl

A common framework for implementing and using log densities for inference.

bayesian bayesian-data-analysis bayesian-inference bayesian-methods julia mcmc

Last synced: 03 Jan 2025

https://github.com/tpapp/LogDensityProblems.jl

A common framework for implementing and using log densities for inference.

bayesian bayesian-data-analysis bayesian-inference bayesian-methods julia mcmc

Last synced: 30 Oct 2024

https://github.com/aesara-devs/aemcmc

AeMCMC is a Python library that automates the construction of samplers for Aesara graphs representing statistical models.

gibbs-sampling hmc mcmc ppl samplers symbolic-computation term-rewriting

Last synced: 11 Nov 2024

https://github.com/asael697/bayesforecast

Automatic forecasting and Bayesian modeling for time series with Stan

bayesian-inference forecasting-models mcmc stan time-series-analysis

Last synced: 05 Dec 2024

https://github.com/mfreidank/pysgmcmc

Bayesian Deep Learning with Stochastic Gradient MCMC Methods

bayesian-inference markov-chain-monte-carlo mcmc python stochastic tensorflow

Last synced: 22 Oct 2024

https://github.com/tpapp/dynamichmcexamples.jl

Examples for Bayesian inference using DynamicHMC.jl and related packages.

bayesian bayesian-data-analysis bayesian-inference julia julia-language julialang mcmc

Last synced: 12 Oct 2024

https://github.com/chunyuanli/psgld

AAAI & CVPR 2016: Preconditioned Stochastic Gradient Langevin Dynamics (pSGLD)

mcmc preconditioner sampling-methods stochastic-gradient-descent

Last synced: 28 Nov 2024

https://github.com/aesara-devs/aehmc

An HMC/NUTS implementation in Aesara

hmc mcmc nuts symbolic-computation

Last synced: 11 Nov 2024

https://github.com/SebastianBocquet/pygtc

Make a sweet giant triangle confusogram (GTC) plot

bayesian-data-analysis data-visualization mcmc

Last synced: 30 Oct 2024

https://github.com/turinglang/mcmctempering.jl

Implementations of parallel tempering algorithms to augment samplers with tempering capabilities

julia-language mcmc mcmc-sampling multimodality probabilistic-programming turing-language

Last synced: 31 Oct 2024

https://github.com/posterior/treecat

A Bayesian latent tree model of high-dimensional heterogeneous data

bayesian machine-learning mcmc python unsupervised-learning

Last synced: 25 Oct 2024

https://github.com/dm13450/hawkesprocesses.jl

MCMC Inference for a Hawkes process in Julia

bayesian-inference hawkes-process julia mcmc

Last synced: 23 Oct 2024

https://github.com/cbg-ethz/scicone

Single-cell copy number calling and event history reconstruction.

bayesian-inference cancer-genomics copy-number-variation mcmc single-cell

Last synced: 17 Nov 2024

https://github.com/hendersontrent/posteriorplots.jl

Graphical tools for Bayesian inference and posterior predictive checks

bayesian bayesian-inference bayesian-statistics julia-language mcmc

Last synced: 12 Oct 2024

https://github.com/cbg-ethz/bnpc

Bayesian non-parametric clustering (BnpC) of binary data with missing values and uneven error rates

binary-data clustering genotyping mcmc split-merge

Last synced: 17 Nov 2024

https://github.com/teddygroves/bibat

A batteries-included template for Bayesian data analysis projects

arviz bayesian-statistics cmdstanpy cookiecutter mcmc python stan template-project

Last synced: 15 Nov 2024

https://github.com/poissonconsulting/mcmcr

An R package to manipulate MCMC samples

coda cran mcmc r rstats

Last synced: 02 Jan 2025

https://github.com/amarazov/mccpy

Монте Карло изчисления с Python

mcmc monte-carlo python

Last synced: 12 Nov 2024

https://github.com/zang-langyan/markov-chain-monte-carlo-mcmc

Markov Chain Monte Carlo MCMC methods are implemented in various languages (including R, Python, Julia, Matlab)

julia markov-chain-monte-carlo matlab mcmc mcmc-methods mcmc-sampler python r

Last synced: 08 Nov 2024

https://github.com/itsdfish/DifferentialEvolutionMCMC.jl

A Julia package for Differential Evolution MCMC

differential-evolution-mcmc julia julialang mcmc

Last synced: 13 Nov 2024

https://github.com/itsdfish/differentialevolutionmcmc.jl

A Julia package for Differential Evolution MCMC

differential-evolution-mcmc julia julialang mcmc

Last synced: 14 Oct 2024

https://github.com/4ment/physher

A multi-algorithmic framework for phylogenetic inference

bayesian-inference c genetic-algorithm maximum-likelihood mcmc phylogenetics variational-inference

Last synced: 07 Nov 2024

https://github.com/synesenom/ran

Library for generating various random variables

distribution javascript mcmc random statistics test

Last synced: 08 Nov 2024

https://github.com/ardiad/bayesgarch

Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations

bayesian garch mcmc risk-models student

Last synced: 28 Nov 2024

https://github.com/turinglang/ellipticalslicesampling.jl

Julia implementation of elliptical slice sampling.

julia-language markov-chain-monte-carlo mcmc slice-sampling turing

Last synced: 08 Nov 2024

https://github.com/TuringLang/EllipticalSliceSampling.jl

Julia implementation of elliptical slice sampling.

julia-language markov-chain-monte-carlo mcmc slice-sampling turing

Last synced: 13 Nov 2024