Projects in Awesome Lists tagged with ontology

https://github.com/greenelab/hetontology

Biological ontologies as hetnets in Neo4j

database dataset neo4j networks ontology tool

Last synced: 13 Nov 2024

https://github.com/dhimmel/gene-ontology

User-friendly Gene Ontology annotations

annotations gene-ontology genes github-pages ontology rephetio

Last synced: 14 Oct 2024

https://github.com/nfdi4plants/nfdi4plants_ontology

An intermediate ontology for plants used by DataPLANT to fill the ontology gap

broker dataplant dbpo nfdi4plants ontology

Last synced: 10 Dec 2024

https://github.com/CaSkade-Automation/CaSkMan

CaskMan - An OWL ontology to model capabilities and skills in manufacturing

automation formal-models industrial-automation industry-40 industry-standard machine-capabilities machine-skills ontology semantic-web

Last synced: 25 Oct 2024

https://github.com/conema/zaga

More than the default behavior of a GA device, the robot, with this project can run custom Choregraphe projects, by saying something like "execute object recognition".

choregraphe google-assistant google-assistant-sdk nao nao-robot naoqi object-detection object-recognition ontology robot robotics sentiment-analysis sentiment-polarity stanford-corenlp tensorflow zora

Last synced: 12 Oct 2024

https://github.com/pawamoy/django-cerberus-ac

Django Cerberus Access Control, extended permission system.

access control django ontology permissions role-based-access-control security

Last synced: 23 Oct 2024

https://github.com/IHCC-cohorts/GECKO

Genomics Cohorts Knowledge Ontology

cohort genomics obofoundry ontology

Last synced: 23 Oct 2024

https://github.com/inrupt/solid-common-vocab-js

A library providing JavaScript objects to represent the individual terms (i.e. the classes and properties) defined in RDF vocabularies.

javascript ontology rdf terms vocabulary

Last synced: 19 Dec 2024

https://github.com/chanzuckerberg/ontology-ui

Ontology visualizer

human-cell-atlas ontology single-cell single-cell-rna-seq

Last synced: 14 Nov 2024

https://github.com/inrupt/solid-common-vocab-rdf

Collections of RDF vocabularies and Artifact Generator YAML configuration files used to generate and bundle together source-code artifacts that represent the terms (e.g. the Classes, Properties and Literals) from those (and remote) RDF vocabularies.

ontology rdf vocabulary

Last synced: 19 Dec 2024

https://github.com/cyang0128/Nutritional-epidemiologic-ontologies

machine-readable nutritional epidemiologic (meta-)data

data-sharing dietary-intake epidemiology nutrition obofoundry ontology ontology-search strobe-nut

Last synced: 23 Oct 2024

https://github.com/fogfish/schemaorg

Go types of schema.org ontology

dublin-core ontology schema-org structured-data

Last synced: 27 Oct 2024

https://github.com/NuriaQueralt/covid19-epidemiology-ontology

Epidemiology and monitoring ontology for COVID-19

axiom-patterns biohackeu20 covid-19 epidemiology obo obofoundry ontology owl

Last synced: 23 Oct 2024

https://github.com/danielwilms/vsso-demo

This repository contains a proposal for possible next steps in the development of the Vehicle Signal Specification Ontology (VSSo). The implementation is part of the paper titled An evolving Ontology for Vehicle Signals submitted to the Recent Results Track of 2021 IEEE 93rd Vehicular Technology Conference: VTC2021-Spring, Helsinki.

ontology vehicle-signal-specification vss

Last synced: 16 Nov 2024

https://github.com/mdesalvo/owlsharp

Lightweight and friendly .NET library for realizing intelligent Semantic Web applications

geosparql inference-engine ontology owl owl-dl owl-time owl2 rdfs reasoner skos skos-xl swrl

Last synced: 10 Nov 2024

https://github.com/daniel-km/omeka-s-module-customontology

Module for Omeka S to create specific classes and properties when no standard ontologies can be used.

omeka-s omeka-s-module ontology properties vocabularies

Last synced: 11 Nov 2024

https://github.com/angelosalatino/kos-rf

A Survey on Knowledge Organization Systems of Research Fields: Resources and Challenges

classification-schemes controlled-vocabularies digital-libraries knowledge-organization-systems ontology ontology-learning ontology-mappings scholarly-knowledge scholarly-ontologies semantic-web taxonomy thesaurus

Last synced: 16 Nov 2024

https://github.com/greenelab/annotation-refinery

A python package that consists of functions that process publicly available annotated sets of genes

gene-sets ontology package script tool

Last synced: 13 Nov 2024

https://github.com/acdh-oeaw/arche-schema

This is the repo for the ACDH-Ontology. The ontology is going to be used to describe resources in the acdh-repo.

arche ontology

Last synced: 22 Nov 2024

https://github.com/AbstractMachinesLab/dota-ontology

a Dota 2 Ontology

dota2 knowledge-base ontology

Last synced: 14 Nov 2024

https://github.com/weso/rdfsync

Wikibase to RDF. An algorithm to synchronize data between the ontology or RDF files and a given Wikibase instance.

ontology wikibase-instance

Last synced: 06 Nov 2024

https://github.com/leostera/wittgenstein

:books: A semantic, real-time, distributed, knowledge base.

distributed-systems information knowledge-base knowledge-database ontology realtime-database semantic-web

Last synced: 29 Oct 2024

https://github.com/sdsc-ordes/respecter

Turn an RDF-serialized ontology into a ReSpec styled HTML page

html ontology rdf rdflib respec sparql

Last synced: 07 Nov 2024

https://github.com/CaSkade-Automation/mtp2skill

An automated mapping approach to transform a Module Type Package into a specific skill and capability ontology. This transformation allows to bridge the gap between service-based production approaches from process and discrete manufacturing.

machine-capabilities machine-skills mapping module-type-package mtp ontology owl

Last synced: 25 Oct 2024

https://github.com/kban-dev/kban

KBAN: Knowledge Base Archive Network https://kban.org/

knowledge-base knowledge-graph linked-data ontology semantic-web

Last synced: 06 Nov 2024

https://github.com/jingcshi/ICON

Implicit Taxonomy Completion

ontology ontology-engineering taxonomy taxonomy-induction

Last synced: 19 Nov 2024

https://github.com/delonnewman/activerecord-pull

A simple query interface for pulling deeply nested data from records.

activerecord activerecord-queries database declarative-programming eav-model graph nested-objects nested-structures object-oriented-programming ontology query querying relational relational-database relational-databases ruby ruby-on-rails sql-databases tree trees

Last synced: 02 Nov 2024

https://github.com/caskade-automation/mtp2skill

An automated mapping approach to transform a Module Type Package into a specific skill and capability ontology. This transformation allows to bridge the gap between service-based production approaches from process and discrete manufacturing.

machine-capabilities machine-skills mapping module-type-package mtp ontology owl

Last synced: 09 Nov 2024

https://github.com/quantori/kifparser

SUO-KIF ontology parser

ontology parser python suo-kif

Last synced: 10 Nov 2024

https://github.com/obophenotype/c-elegans-development-ontology

C. elegans Development Ontology

caenorhabditis-elegans development nematodes obofoundry ontology wormbase

Last synced: 23 Oct 2024

https://github.com/weso/hercules-sync

Tools to synchronise data between the ontology files and Wikibase instance for the Hercules project at University of Murcia.

asio ontology rdf semantic-web wikibase

Last synced: 06 Nov 2024

https://github.com/nicholascar/decprov-ont

A Web Ontology Language (OWL) ontology extending the PROV ontology for modelling decisions and thus the causes for actions or the use or generation of things

decision-modelling decisions ontology owl provenance web-ontology-language

Last synced: 25 Nov 2024

https://github.com/luckinet/ontologics

Code-Logics to Handle Ontologies

interoperability ontology

Last synced: 04 Dec 2024

https://github.com/fed/pizza-ontology

A sample pizza ontology that describes various pizzas based on their toppings 🍕

ontology owl protege

Last synced: 17 Nov 2024

https://github.com/vemonet/tao

✒️ Text Annotation Ontology

ontology owl-ontology text-annotations

Last synced: 11 Nov 2024

https://github.com/maastrichtu-ids/semanticscience-website

Website for the Semanticscience Integrated Ontology (SIO)

ontology science-fair

Last synced: 21 Dec 2024

https://github.com/linkml/linkml-sparql

Maps LinkML queries to SPARQL and back (ALPHA)

linked-data linkml ontology orm queries rdf rdflib semantic-web sparql

Last synced: 10 Nov 2024

https://github.com/DiseaseOntology/DiseaseDriversOntology

Ontology for drivers and triggers of human diseases, built to classify ExO ontology exposure stressors. An application ontology. Built in collaboration with EnvO, ExO, ECTO and ChEBI.

disease obofoundry ontology

Last synced: 23 Oct 2024

https://github.com/mconlon17/organization-ontology

Development work -- an OBO, BFO organization ontology based on ROR/GRID

bfo grid obo ontology organizations ror vivo

Last synced: 25 Dec 2024

https://github.com/biopragmatics/biolookup

🔍 The Biolookup Service retrieves metadata and ontological information about biomedical entities.

bioinformatics biology biopragmatics cheminformatics chemistry flask metadata obofoundry ontology

Last synced: 26 Nov 2024

https://github.com/fr4ncidir/WoT_Ontology

Web Of Things Thing Ontology

internet-of-things ontology web-of-things

Last synced: 24 Oct 2024

https://github.com/sejas/muia-assessment-applewatch-atrial-fibrillation-ontology

Basic ontology to represent the article: "Large-Scale Assessment of a Smartwatch to Identify Atrial Fibrillation"

ai applewatch atrial-fibrillation biomedical-informatics muia ontology

Last synced: 09 Nov 2024

https://github.com/alexislebis/capten

Capitalization of Analysis Processes for Technology Enhanced learNing

analysis-process capitalization hubble learning-analytics ontology prototype research-project technology-enhanced-learning workflow

Last synced: 29 Nov 2024

https://github.com/eccenca/braine-vocab

The BRAINE ontology consists of vocabularies for describing services, devices, workflows and constraints.

braine ontology vocabulary

Last synced: 21 Nov 2024

https://github.com/radical-data/mosa-ontology

A decolonial ontology for heritage.

data-modeling decolonial decolonization heritage heritage-science indigenous indigenous-data-sovereignty ontology owl owl-ontology turtle

Last synced: 11 Nov 2024

https://github.com/casperwa/turtle-canon

A tool for canonizing Turtle (`.ttl`) ontology files.

ontology turtle

Last synced: 03 Dec 2024

https://github.com/logicalhacking/isabelle_dof

Isabelle/DOF is a novel Document Ontology Framework on top of Isabelle. Isabelle/DOF allows for both conventional typesetting as well as formal development.

certification isabelle isabelle-dof ontology

Last synced: 16 Nov 2024

https://github.com/maastrichtu-ids/audioset-owl

🔊 A Jupyter Notebook to edit the AudioSet ontology

documentation jupyter-notebook ontology ontology-editor

Last synced: 21 Dec 2024

https://github.com/rat-genome-database/XCO-Experimental-Condition-Ontology

Experimental Condition Ontology maintained by RGD

clinical-research experimental-conditions human laboratory model-organisms obo obofoundry ontology owl semantic-web xco

Last synced: 23 Oct 2024

https://github.com/vjcitn/ontoproc

bioinformatics genomics ontology

Last synced: 11 Nov 2024

https://github.com/obophenotype/sibo

Social Insect Behavior Ontology

obofoundry ontology

Last synced: 23 Oct 2024

https://github.com/EBISPOT/clyh_ontology

Home of the Clytia hemisphaerica Development and Anatomy Ontology (CLYH)

obofoundry ontology

Last synced: 23 Oct 2024

https://github.com/rcqx/linked-building-data_office

Testing open-source building information ontologies/vocabularies for data integration and data retrieval

knowledge-graph ontology rdf semantic-web sparql

Last synced: 11 Dec 2024

https://github.com/cmungall/agrovoc-obo

Agrovoc alignment to OBO Ontologies

mapping obofoundry ontology ontology-matching sssom

Last synced: 18 Dec 2024

https://github.com/hrshdhgd/llm-change-agent

LLM Change Agent is a command-line interface (CLI) tool designed to interact with various language models for generating and modifying ontology definitions. It offers a range of functionalities to streamline KGCL command generation tasks.

ai artificial-intelligence change-language gpt kgcl llm ontologies ontology

Last synced: 05 Nov 2024

https://github.com/harium/suneidesis

A project to represent knowledge

chatbot discord-bot java knowledge ontology slack-bot

Last synced: 24 Nov 2024

https://github.com/vemonet/ontogpt-api

⛏️ An API to extract informations from text using OntoGPT

gpt-3 linkml ontology

Last synced: 11 Nov 2024

https://github.com/icij/ftm.java

Implementation of the Follow The Money API in Java

java models ontology

Last synced: 07 Nov 2024

https://github.com/anergictcell/pyhpo_v1

Python library to work with HPO (Human Phenotype Ontology) terms and their gene/disease associations

bioinformatics clinical-informatics hpo hpo-similarity human-phenotype-ontology ontology phenotype-ontologies

Last synced: 10 Nov 2024

https://github.com/vjcitn/biocedamhacks

Ideas and code snippets for Elixir Biohackathon 2024 project 27

bioconductor edam elixir ontology

Last synced: 21 Dec 2024

https://github.com/maastrichtu-ids/euraknos-ontology

🌾 OWL Ontology for the EURAKNOS project about EU agricultural resources

agricultural-modelling agriculture agriculture-research agroforestry ontology

Last synced: 21 Dec 2024

https://github.com/caskade-automation/cask

OWL ontology to describe capabilities and skills of things. Extends CSS meta model but still stays on an abstract level allowing for concrete implementations in different domains / industries.

capabilities ontology owl skills

Last synced: 09 Nov 2024

https://github.com/CaSkade-Automation/CaSk

OWL ontology to describe capabilities and skills of things. Extends CSS meta model but still stays on an abstract level allowing for concrete implementations in different domains / industries.

capabilities ontology owl skills

Last synced: 25 Oct 2024

https://github.com/biopragmatics/debio

🥮 Decentralized Biomedical Ontology

obofoundry ontology

Last synced: 26 Nov 2024

https://github.com/dhimmel/uberon

User-friendly anatomical structures data from the Uberon Ontology

anatomy hetionet ontology rephetio tsv uberon

Last synced: 30 Nov 2024

https://github.com/multicatch/fuddiwikigenerator

A tool to generate wiki pages from ontology

generator ontology wiki-pages

Last synced: 14 Nov 2024

https://github.com/dimits-ts/athens-conceptual-model

A conceptual model written on OWL-RDF (w/ attached report) to be used for an online guide for urban areas. Focuses on the area around Syntagma Square.

cidoc-crm conceptual-modelling ontology owl rdf sparql

Last synced: 27 Dec 2024

https://github.com/k00ni/govi

The Global Ontology and Vocabulary Index (GOVI) is meant to be a Community-driven project to maintain an index of all available RDF ontologies and vocabularies. The index is basically a big CSV file, containing a list of URLs to ontologies and vocabularies, plus a few meta data.

csv index ontology ontology-repository

Last synced: 14 Oct 2024

https://github.com/simeonhristov99/icy

Ontology about ice cream types developed with Protégé.

icecream ontology protege

Last synced: 14 Nov 2024

https://github.com/mconlon17/vivo-etl

Create VIVO data using a simple pipeline approach suitable for any source and any target (VIVO, new VIVO, other)

ontology sparql triples vivo

Last synced: 25 Dec 2024

https://github.com/prozion/cpu-ontology

Онтология городских сообществ на основе трехслойной модели Святослава Мурунова

ontology owl-ontology tabtree-ontology

Last synced: 24 Dec 2024

https://github.com/aot29/mwRequirementsAnalysis

Facilitating the analysis of requirements in a software development process using semantic MediaWiki.

mediawiki ontology rdf requirement-specifications requirements-engineering requirements-management wiki

Last synced: 04 Nov 2024

https://github.com/mandarancio/tag-extractor

Python flickr and instagram tag extractor (by location)

flickr gis hashtag instagram nlp ontology semantic splitter tag tokenizer twitter

Last synced: 29 Nov 2024

https://github.com/ucm-gaia/reconto

Ontología que modela y describe sistemas recomendadores y sus componentes.

ontology owl recommender-systems

Last synced: 01 Dec 2024

https://github.com/drsnowbird/uco-shacl-validator-docker

UCO SHACL Validator Web UI / REST API

ontology rdf shacl-shapes unified-cyber-ontology

Last synced: 14 Nov 2024

https://github.com/cmdoret/mtg_ontology

An ontology describing cards in Magic The Gathering.

linkml mtg ontology rdf

Last synced: 26 Dec 2024

https://github.com/lambdamusic/dbpedialinks

Navigation of the links to DBpedia generated in the context of https://github.com/dbpedia/sci-graph-links

dbpedia django linked-data linked-open-data ontology publications rdf springernature

Last synced: 13 Nov 2024

https://github.com/drsnowbird/uco-app-docker

UCO-app-docker: web app for UCO integrating with UltraGraphQL, Jena-Fuseki, SHACL Validator

graphql-server ontology shacl-shapes uco

Last synced: 14 Nov 2024

https://github.com/open-risk-academy/academy-course-npl27062

Supporting material for the Open Risk Academy course "Introduction to the EBA NPL Templates"

credit-risk elearning ontology regtech semantic-web

Last synced: 30 Nov 2024

https://github.com/couragecowardlydog/ctakes-wrapper

A simple spring-boot wrapper for CTakes

ctakes ctakes-clinical-pipeline cui ontology snomed-ct tui uima umls

Last synced: 23 Nov 2024

https://github.com/khaledashrafh/airfield-ontology

This repository contains an ontology built using Protégé for modeling the domain of airfields, runways, taxiways, gates, and aircrafts. The ontology captures various constraints and relationships between different entities in the airfield domain.

airfield knowledge-engineering ontology ontology-engineering owl-ontology protege protege-owl-editor semantic-web

Last synced: 07 Dec 2024

https://github.com/portalnetwork/ons

🔍 Documents and implementations for the Ontology Name Service.

blockchain ons ontology

Last synced: 30 Dec 2024

https://github.com/damourchris/ontologylookup.jl

A Julia Interface to the Ontology Lookup Service

julia julia-package ontology ontology-lookup-service

Last synced: 18 Dec 2024

https://github.com/sbl-sdsc/kg-onto

Create Node and Relationship files from BioPortal ontologies for import into Property Graphs

data-ingestion data-integration knowledge-graph neo4j ontology property-graph

Last synced: 09 Dec 2024

https://github.com/gauravcodepro/ko-phylogenomics

analyzing bacterial genome based ontologies and phylogenomics informativeness

bacterial-genome-analysis bacterial-genomes geneontology genome-annotation ontologies ontology plant plantgenomes

Last synced: 09 Nov 2024

https://github.com/txpo-ontology/TXPO

Repository for the Toxic process ontology, TXPO.

obofoundry ontology

Last synced: 23 Oct 2024

https://github.com/blankdots/personasontology

PersonasOnto Ontology and Microdata schema

ontology owl schema-org

Last synced: 10 Nov 2024

https://github.com/uvaio/datasets

Notebooks for data processing, scraping, machine learning

data dataset jupyter jupyter-notebook learning machine ml model ontology

Last synced: 28 Nov 2024

https://github.com/UlisesGascon/POC-azure-IOT-DTDL-ontology

The power of Ontology in the Digital Twins Definition Language universe to build powerful and sustainable devices.

azure azure-iot-hub azure-iothub dtdl dtdl-models iot ontology

Last synced: 14 Nov 2024

https://github.com/khaledashrafh/university-management-ontology

This project aims to create an ontology for a university using the Protege editor. The ontology defines various classes and their relationships within the university domain. It also includes queries and rules implemented in Protégé and CLIPS to retrieve information from the ontology.

clips gui knowledge-engineering ontology ontology-engineering protege protege-owl-editor semantic-web